Browse of TCMCG007C18493 protein

CDS

Accession Number	TCMCG007C18493
gbkey	CDS
Protein Id	XP_009132541.2
Location	join(6697467..6697796,6697942..6698028,6698111..6698182,6698264..6700200,6700543..6700747,6701039..6701518,6701637..6703286,6703362..6703418)
Gene	LOC103857134
GeneID	103857134
Organism	Brassica rapa

Protein

Length	1605aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_009134293.3
Definition	protein SHORTAGE IN CHIASMATA 1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	-
Description	-
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	-
KEGG_ko	-
EC	-
KEGG_Pathway	-
GOs	GO:0000003        [VIEW IN EMBL-EBI] GO:0000280        [VIEW IN EMBL-EBI] GO:0000712        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005911        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006259        [VIEW IN EMBL-EBI] GO:0006310        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0007049        [VIEW IN EMBL-EBI] GO:0007059        [VIEW IN EMBL-EBI] GO:0007127        [VIEW IN EMBL-EBI] GO:0007131        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009506        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0022402        [VIEW IN EMBL-EBI] GO:0022414        [VIEW IN EMBL-EBI] GO:0030054        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0035825        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0045132        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048285        [VIEW IN EMBL-EBI] GO:0051304        [VIEW IN EMBL-EBI] GO:0051307        [VIEW IN EMBL-EBI] GO:0051321        [VIEW IN EMBL-EBI] GO:0055044        [VIEW IN EMBL-EBI] GO:0061982        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0098813        [VIEW IN EMBL-EBI] GO:0140013        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGCGAGGTCGATTTCTCAACATCGACTACTTCTCTACTCCGCCTTCTCAGGTATACGAAGCCCTAGGCTTCCTCAATCTCCCAGCTCCCGATGATTTCCCGGCTCCTCTCTTCCGCGACCGGAGCGAAGAGTTTCTTCGATTCGAACCTGTCGAAGGCTTCTCTCTCCCGATCGATAATCTCCCTATCGGAGATGCGTTATCGAAGTTCCTCTCCGACGTGGTTCCCGATCGCGTCAGCGTCGACTACGGAGCCTTCGAGATGGATTACTCTTCCCTCGGAGACGAGCTTAAGTTTATTCTCGGCCGTGGAGATCCTCAGTTCCTCGAGAAGAGTGAAGGAGATGCCATTGAGGAGAAAGTTACACTAGATTTGAACATTGTTCAGCTGGAGACTCCAGAGATGGATTTCGAAATGGAGAATAAGCTCTCATCGAAGATTGAGGATCTCCAATGTCTCTCTAAAGTTCTAGAGATCGAAAATGAGCCGGTTAAGTTCGAGGAGTCAGATGTTATCCTACAGAACTCAAGCGACATCAAGCAGGAGATTTATTCTGTTGATTGCATTTCTTCTGATTACTTCACAGAGAACAGTACTTCGGTGAGAGAAGATGAATGCTTCCGCAAGAATCGACCATGGTTCAGAGATGCTGTATTTCCCCTTCTAGAAGTGGATGAAGTAAACTTGAACGAACTATCATGCTTGTCTATGCGTGATAAAGTATTTGCTGTTCTCGAAAGGATTGAGCCCAGAGATATGGATACAGAGAGTTCTCTCGTTATCAACTCTAAGGAGCTTATAGGCTCTAAGGATTATGATATATTGGATATCCTCTCTACGGATTGCTATTCAAACAAGAGTGTCCAGTCTGATGTGGTACCGCAGGAAATTGATATAGTGACTATCTTGGAAATACCAAATCCTGAGGAAAGCTTTCAGTTTGATCAGGGGAAGCTGGCTGTTGATGTGGTCTCGGTAAATTTTGAGGAAGTTCAGATCTTGGATGTGGAGATATCTGATGTTTTCAGCAGCTTCTGTTGTCTTCAACAACCCATTGAACCAGAAATATGTCCCGGGATGTTCAGTGAAGAGATGAACTTCAAGAGTTTCGATGAGTTAGTTGTCAGTTCTGAACTTGCCTTCGCAGATGATGCCTTCAAGTCTATGCCTACTCCTATCTTAAATGATTATGAGATAACAAGATCTCTGGAACTCATTTATGAGAATTATTTGTCAAAGATCAAGCCTCAAGCGTTTCCGGCATCAAATGACATATACTTGCCGCTAAACCTTCTTGAGGAGACAAAGCACAACCATGAAGCCCATTTTTGTGATTATCTGTCTGAAGCAATAGTTACATGCAACATTGATTATGATTTGGAATCGTTACAAGGAGACAGATGGGTTTATGATTTCGTGCTCTCTGAAGATGCTTTCTGTCAGCCACTTGTAGAGAGATGCACTGAACCTTTTTATGGTATATCTACCCTTGATGAGTACCCTCCAGTCAATACTTCTCATGGGTTATTGGAACGCCCTTGTCCAGAAACAGGATCCGGGGATTGTGGAAGGGATGATTACGCTAAAAAGGCTGCCCTGGTGTTCAAATCAATGTCTGCTTTTGATGACTTAACTTTTTTCATGGATCCTCAGAAAGCTGTGATTGAAGAGAATCTTGAGTCTAGAGTCGAAGCTGCTAAGACTGCCAACCATAAAATTACGTCCACTGACTCAAAGGCTTCATGTATATCTGGTGGCATGCACCCAAGCTCGAAGACAGAGGATATGAAAGTTCACAGTGTTCGCCCTTCAGAAAATATTCTGGCCCTTGTTCGGGATTTTGAGAAGAGCTATTTAACTCTCGTGAAGGATGAACAAGAGTTGATTTCAACTTTATCAGAAGATAAACTGAAGTTACTCAGCATTTCGAAAGGAAAGCTTATCGACTGCATACGAAAGGCAAATGTCCACAAAACACCGTCAGCTGATGATAAGACCTTCACGTTTGCATTGCTACTAGCAATTAAACAGATGACATGGTATTTATGTTTCTTTGGTATCCGTGTGGCATATCTCTATCTTAACAAGCTATGTCGGAGCTCAAATCCCATGAAGCTAGGATTGCACACGCTTTACTCATCATTTGAATCAGAACACATGTCAACTGAGAGAGACATCACTAGATCACATCCATCCCTAGCTGTTATCCAGGGGATTTTACAGTCAAAAGTTGTCCGTGGGAATTCCAAAGCGTTACTTTTGGCGGAGAAAGTTTTTTGGTCCTCGCTGAAGAGGCTATTGGTGTCCATGGGGTTATCTTACAATGAGCTCAACAGTCCGTCCCCAAGTGGAAATCAACTGAATCTTAATGAAGCAACAGAACCTTGTTCCCTGCCAACCACAGACTGTCTGCTCGTCGCTTACGAGCGCATTTCTCCATCTTTTCCTGTGGAGAATTTCAGCGTCATTGTAGAATATGGAGGTCCAAATGCATCGCCCAGAGTCTCATCTCCTTTAAAGTTGGACTCCTTTCCTTGCTTTCATTTTATAAAAGTGGAGCTGGATATGTCCAGTGCGTCCGGGCAACTCTCTGCAGGTGTTACAGTACCTTATAGTCTCAAAATGGTAAAGGGAGATGAATTTGAGATGAAAACTGGGTGGTTGGAAGAAGTGTTGAACTTTGTTCCACTTGAAAGTTTGTGTTCCGCTGAATCTTCAGAATCTACGAAGGAATCTAAATTTGACTCCGTGCCGCAAGAATCTGGAAGAAAATTTGGGATAAATGAGCAGGGAGTTCTCTCTGACCAAAGAGCTGTGATTGTAGTGAACACAAAAACTGTTGACAAGGAGATGATAATATCCAGAAGAAGTACATATCAAAAGGTCTTGGCAATGGAAAAAGAAGGAGTGCAAGTTGTGGAGCGCGATTCCGATCTACCTGTGGACCTGATGCTAAGTCCTGCGATTTGTCTAGTCTGGTATGATTGTGGAAAGGTTAGTAAGAAGTCGGGTGCCACTATTGGTGCTTCCTCGAGCTCACTTTCATGGATTGGGGATATCGCAACCAATGTTTTGACGTCATTGAGTTTCGGTTTCAGCACCTGTGTTATGGTTTTTGAGGGGGTACCCACTTGCCTGGCTACAGTAATGGACTCTTCTGATGAACTGTATGCAGCAGCTGGCAGCCTGGGAATCAATTTACAGATCTTTTACTCATCGTCAGCTGATTTAAGTGATGAAATAATACTGAGGTGTATCAAATCTTCTGTTAAATCTTCACAAGTCCATGCCAAAATGCCTGAGTCAGAATCTCTTGCAGAATCATTTCTCACCAAGTTTCCTTCCGTGAACCCGCTTACAGCTCATGTAATTCTGTCATCTTCTGGATCACTTCTCGAATTCATGAAGCTCCCACATAGTAGCAAGGTTCAAATGTTGCAAAAGTATCATGTACCTGAAGAGAGTGTTGAACTCTTCAGTTCATTATGCAGATACGGTGCAAGGGAGGACTCCAAATCTGTAATGACAGACAGCGCTTCTTCTGTATCTTCTGGAGCTGACTCAGACACCCACCATCTCAATGTCCATTCTGGTTCGAAAAGGAAACAGTACATTACTGGGAAAGACGAGACTGATATGGAAGACTCGATCCATTGTGTTCCTTCGACAGAGTTTGCTGGTACGAAGCGCAAGCCTTCAGGGGATTTCCAACTTGATGATCCTTGGTCATCTAGAGATCATGAGATGTTTCATTTTGACCCTGTCACTGAATTCCCCGATGCACCTCTCAAACCTTCTGGGATCATTCATCCTAACGACTCTTGGCCATCTAAAGATCCTGAGAGGTTTGACAAGAAGTCAGGACCTGGTTCTTCATCGAAGGACACGTTCTGGGAGAATGATTTTGGAGCCGAGGACAACCTTCCTGGATTTGAAAGTTGGAGTTTCCCCGTTACAGATGAATCCATGAGTCAGAACAGAGGACGCAAGTTTCCTGTGATGGGACAAGTTAACTTGCACGACACTAGAAACTCAGCGAACTTCATGGGAGACTACAAAGGTGAAGTTATCAACATAGAGGATCGTAAGTTTCTCGAGGAAGATCTCCCTCCTTCTCCTGGTTATAACCGGTACTCTCCAGTAGTTTCTGATGTTGCTGAAGATCAGAGAAAATCGAAGTCTGCAAGGAAGTTATCTTTCTCTGAATCTATCCAGCCTATCTTCCCAACAGCAGCTGAGATTAACTTCAGTTCTGAGAGGTTACCTACTACTCCTTCGCGTGGCTATCTTGACAACTTCCCAGCAAAACGTCAACGGACCCTTCTGGAGGAAGTCTTAACACGGAGATCTTCAGTTTCCACAACAGATCATCCATTTCAAGAAGAGATATCACATTTTGGTGGGTCTCCACTATCAAACGCAATCCGTTCTCCAGATCCAGTACGACGTTCTCCTTGGACTGTTGATTTTCTCAACAGAGTCAGAGAAAGGAGTACAGAAAGGAAGCAGCAACTATCACTTCTCTCTCATCTCACTCCTTCTAGTCTGGAAACTCGAGTTGACCCAAAGAAACCTAATATCAAGAGGAAGAGTCCTTCCATAATAGAATTTTTCAAGCATAAAGGAGGCAACGCTCGTAGTAGCAGAGTTCCAGAAGAGAGAAAGCAGAAGCGGTTCAAGAATTCTTCAGCCTCGCCACAAAACGAGAGATTTGACTCGCTTCTTAGGTCGTATACGCCAGTTGATAAGCGAGCAAAACAGTCTCTATCTTTCGCTGGGAGTGGATCTGGAGGCCAAACAAAACTGGTCTGGAAGTAA

Protein:   MRGRFLNIDYFSTPPSQVYEALGFLNLPAPDDFPAPLFRDRSEEFLRFEPVEGFSLPIDNLPIGDALSKFLSDVVPDRVSVDYGAFEMDYSSLGDELKFILGRGDPQFLEKSEGDAIEEKVTLDLNIVQLETPEMDFEMENKLSSKIEDLQCLSKVLEIENEPVKFEESDVILQNSSDIKQEIYSVDCISSDYFTENSTSVREDECFRKNRPWFRDAVFPLLEVDEVNLNELSCLSMRDKVFAVLERIEPRDMDTESSLVINSKELIGSKDYDILDILSTDCYSNKSVQSDVVPQEIDIVTILEIPNPEESFQFDQGKLAVDVVSVNFEEVQILDVEISDVFSSFCCLQQPIEPEICPGMFSEEMNFKSFDELVVSSELAFADDAFKSMPTPILNDYEITRSLELIYENYLSKIKPQAFPASNDIYLPLNLLEETKHNHEAHFCDYLSEAIVTCNIDYDLESLQGDRWVYDFVLSEDAFCQPLVERCTEPFYGISTLDEYPPVNTSHGLLERPCPETGSGDCGRDDYAKKAALVFKSMSAFDDLTFFMDPQKAVIEENLESRVEAAKTANHKITSTDSKASCISGGMHPSSKTEDMKVHSVRPSENILALVRDFEKSYLTLVKDEQELISTLSEDKLKLLSISKGKLIDCIRKANVHKTPSADDKTFTFALLLAIKQMTWYLCFFGIRVAYLYLNKLCRSSNPMKLGLHTLYSSFESEHMSTERDITRSHPSLAVIQGILQSKVVRGNSKALLLAEKVFWSSLKRLLVSMGLSYNELNSPSPSGNQLNLNEATEPCSLPTTDCLLVAYERISPSFPVENFSVIVEYGGPNASPRVSSPLKLDSFPCFHFIKVELDMSSASGQLSAGVTVPYSLKMVKGDEFEMKTGWLEEVLNFVPLESLCSAESSESTKESKFDSVPQESGRKFGINEQGVLSDQRAVIVVNTKTVDKEMIISRRSTYQKVLAMEKEGVQVVERDSDLPVDLMLSPAICLVWYDCGKVSKKSGATIGASSSSLSWIGDIATNVLTSLSFGFSTCVMVFEGVPTCLATVMDSSDELYAAAGSLGINLQIFYSSSADLSDEIILRCIKSSVKSSQVHAKMPESESLAESFLTKFPSVNPLTAHVILSSSGSLLEFMKLPHSSKVQMLQKYHVPEESVELFSSLCRYGAREDSKSVMTDSASSVSSGADSDTHHLNVHSGSKRKQYITGKDETDMEDSIHCVPSTEFAGTKRKPSGDFQLDDPWSSRDHEMFHFDPVTEFPDAPLKPSGIIHPNDSWPSKDPERFDKKSGPGSSSKDTFWENDFGAEDNLPGFESWSFPVTDESMSQNRGRKFPVMGQVNLHDTRNSANFMGDYKGEVINIEDRKFLEEDLPPSPGYNRYSPVVSDVAEDQRKSKSARKLSFSESIQPIFPTAAEINFSSERLPTTPSRGYLDNFPAKRQRTLLEEVLTRRSSVSTTDHPFQEEISHFGGSPLSNAIRSPDPVRRSPWTVDFLNRVRERSTERKQQLSLLSHLTPSSLETRVDPKKPNIKRKSPSIIEFFKHKGGNARSSRVPEERKQKRFKNSSASPQNERFDSLLRSYTPVDKRAKQSLSFAGSGSGGQTKLVWK